Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 270 a.a., TatD-related deoxyribonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 60/233 (25%), Positives = 122/233 (52%), Gaps = 14/233 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKY-GIYVTLGY 66
           +DSHCH++        + +V+RA    V  M+T  T++      + + E++  ++ T+G 
Sbjct: 3   VDSHCHLDFPDFAPDIDAVVERARTAGVGTMLTICTHVSRFPGVLAMAERFPDVWCTVGI 62

Query: 67  HPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENIER--QENIFKKFINLSKEV 124
           HP    A++  ++       ++   ++ +GE GLD+  +N  R  Q   F+  +   +  
Sbjct: 63  HPHEA-ANEAEVDAETLVRLTENPRVVGLGETGLDYFYDNSPREAQRRSFRAHLAAGRLS 121

Query: 125 NKPVVIHARGMEERSYDILKND-----VISMYHCYSGSLELAKELIKNGNFISYSTLVCF 179
             PVVIH R  +  +  IL+ +       ++ HC+S   +LA   ++ G ++S S ++ F
Sbjct: 122 GLPVVIHTRDADADTAAILREEREKGPFKALLHCFSSGKDLADLAVEMGLYVSMSGILTF 181

Query: 180 --SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELK 228
             +E  +  + ++ L+ ++VETD+P+L+P   +G++NEP  V++    + E+K
Sbjct: 182 PKAEDVRTAIADVPLDRLLVETDAPFLAPTPKRGKRNEPALVVHTAAKLAEVK 234