Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 262 a.a., TatD family hydrolase from Rhodopseudomonas palustris CGA009

 Score =  111 bits (277), Expect = 2e-29
 Identities = 80/255 (31%), Positives = 138/255 (54%), Gaps = 18/255 (7%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-IYVTLGY 66
           +DSHCH++          IV RA    V +MVT  T +      V + E++  +Y ++G 
Sbjct: 3   VDSHCHLDFPDFADDLAGIVARAEASGVGRMVTISTRVRKLPDLVAIAERFPTVYCSVGT 62

Query: 67  HPGRVNADDN-AIEKVYNFIRSKEKEILAVGEIGLDFDAE--NIERQENIFKKFINLSKE 123
           HP   + +D  A +++     ++  +++A GE GLD+  E  + E QE  F+  I  ++E
Sbjct: 63  HPHHADEEDGIATDELVKL--AQHPKVVAFGEAGLDYFYEMGSREAQERGFRAHIAAARE 120

Query: 124 VNKPVVIHARGMEERSYDILKNDV-----ISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
              P+VIH R  +E    IL++++      ++ HCY+G  +LA + I  G  IS++ ++ 
Sbjct: 121 TGLPLVIHTREADEDCGKILEDEMGKGAFRAVLHCYTGGRDLAMQAIDLGLMISFTGILT 180

Query: 179 F--SEHHKNLVKNLGLENVVVETDSPYLSP--IKGEKNEPKNVINVIETIWELKKDEYSM 234
           F  S+  ++L   L  + V+VETDSPYL+P   +G++NEP  V+   + + E++    S+
Sbjct: 181 FKKSQALRDLAAELPADRVLVETDSPYLAPGKYRGKRNEPSYVVETAKVLAEVR--GVSL 238

Query: 235 DEITKIIYNNTKRLY 249
           DEI +    N  RL+
Sbjct: 239 DEIARQTTENFFRLF 253