Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 262 a.a., TatD family hydrolase (RefSeq) from Shewanella loihica PV-4

 Score = 99.0 bits (245), Expect = 9e-26
 Identities = 72/258 (27%), Positives = 141/258 (54%), Gaps = 22/258 (8%)

Query: 9   IDSHCHVEDKSLNKYREDI---VKRAFEKKVQ--MVTSGTNLGSCRRAVELKEKYGIYVT 63
           IDSHCH++       ++ +   + +A E+ V+  +  +    G      ++     ++++
Sbjct: 3   IDSHCHLDRLKAAPDQDSLKTLLTQAKERGVEYFLCVNVRQQGFASMQAKMAAFDQVFLS 62

Query: 64  LGYHPGRVNAD-DNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINL 120
            G HP  V    D A  + Y     ++ +++A+GE GLD+    E    Q+  F++ I L
Sbjct: 63  AGVHPLDVQEGLDTAQLQSY----LQDPKVVAIGETGLDYYYSGETKTLQQQCFEQQIAL 118

Query: 121 SKEVNKPVVIHARGMEERSYDILK----NDVISMYHCYSGSLELAKELIKNGNFISYSTL 176
           + EV+KP+++H R   E +  +LK    + V  + HC++ + E+AK  I  G +IS S +
Sbjct: 119 AVEVDKPLIVHTRDAREDTIAMLKAGNADKVGGVLHCFTENWEMAKAAIDLGFYISVSGI 178

Query: 177 VCFSE--HHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEY 232
           V F      +++++ +  + ++VETD+PYL+P+  +GE+N+P  V +V E + EL+ ++Y
Sbjct: 179 VTFKNAGELRSVIRKVPKDRLLVETDAPYLAPVPHRGEENQPAFVRDVAEFVAELRGEKY 238

Query: 233 SMDEITKIIYNNTKRLYR 250
             +E+ +   +N  RL++
Sbjct: 239 --EELAEYSGDNFFRLFK 254