Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 273 a.a., hydrolase, TatD family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 66/258 (25%), Positives = 129/258 (50%), Gaps = 20/258 (7%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQM---VTSGTNLGSCRRAVELKEKYGIYVTLG 65
           ++SH H++    +  RE ++ RA    V +   V  G    +  R +   ++  ++  LG
Sbjct: 21  VESHAHLDGNEFDADREAVLDRARAAGVALFGNVFLGPQKWAANRHL-FAQRPEVFFLLG 79

Query: 66  YHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENI--ERQENIFKKFINLSKE 123
            HP    A D A         +++  + AVGEIGLDF  ++   + Q   F+  + +++E
Sbjct: 80  IHPCEAQACDEAALAAMRDAFAQDARLRAVGEIGLDFYWDDCPPDIQRAAFRAQLAMARE 139

Query: 124 VNKPVVIHARGMEERSYDILKNDVIS----MYHCYSGSLELAKELIKNGNFISYSTLVCF 179
           V +PVVIH+R   + +  +L+ +  S    ++HC+ G    A  ++ +G  +S    V +
Sbjct: 140 VGRPVVIHSRDAFDDTLRVLEEEGFSGYPLLWHCFGGDAAQAARIVAHGWHVSLPGPVSY 199

Query: 180 --SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEYSMD 235
             +E  +   + L L+ +++ETD PYLSP+  +G++NEP  ++   + + + +     MD
Sbjct: 200 PANEPLREAARTLPLDRLLLETDCPYLSPVPYRGKRNEPAYMVFTAQAVAQAR----GMD 255

Query: 236 --EITKIIYNNTKRLYRI 251
             E+  +   N +R + +
Sbjct: 256 VVELWTVAGENARRFFGV 273