Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 262 a.a., hydrolase, TatD family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 4e-26
 Identities = 73/241 (30%), Positives = 128/241 (53%), Gaps = 22/241 (9%)

Query: 9   IDSHCHVE-------DKSLNKYREDIVKRAFEKKVQMVTSGTNLGSCRRAVELKEKYGIY 61
           IDSHCH++         +L     +   R  +  + +        S R  V   E+  ++
Sbjct: 3   IDSHCHLDRLKAAPDQPTLELILANAKARGVDYMLCVNVRQQGFESMRDKVAGFEQ--VF 60

Query: 62  VTLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFIN 119
           ++ G HP  V  +   +E++  F  + E +++A+GE GLD+    E    Q+  F++ I 
Sbjct: 61  LSSGVHPLDVK-EGLDVEQIRRF--AMEPKVVAIGETGLDYFYADETKSLQQQCFEQQIA 117

Query: 120 LSKEVNKPVVIHARGMEERSYDILK----NDVISMYHCYSGSLELAKELIKNGNFISYST 175
           L+ EVNKP+++H R   E + ++LK      V  + HC++ + E+AK  I  G +IS S 
Sbjct: 118 LAVEVNKPLIVHTRDAREDTINMLKTGQAEKVGGVLHCFTENWEMAKAAIDLGFYISVSG 177

Query: 176 LVCFSE--HHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDE 231
           +V F      + +++ +  E ++VETDSPYL+PI  +G++N+P  V +V E + EL+ + 
Sbjct: 178 IVTFKNAGELRTVIRKVPKERLLVETDSPYLAPIPHRGQENQPAYVRDVAEFVAELRGER 237

Query: 232 Y 232
           Y
Sbjct: 238 Y 238