Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 278 a.a., hydrolase, TatD family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 14/223 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQMVTSGTNLGS---CRRAVELKEKYGIYVTLG 65
           ++SH H++  +  +   D+++RA +  +  +     LG     R          ++  LG
Sbjct: 21  VESHAHLDLDAFAEDLGDVLQRAQQAGIARM-GNVFLGPQAYARNRHLFDSHPSVFFLLG 79

Query: 66  YHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENI--ERQENIFKKFINLSKE 123
            HP   +  D A         + +  + AVGEIGLDF  ++   + Q   F+  + L++E
Sbjct: 80  IHPCEGHTCDEAALDAMRKAFASDPRLRAVGEIGLDFYWDDCPPDVQRAAFRAQLALARE 139

Query: 124 VNKPVVIHARGMEERSYDILKNDVIS----MYHCYSGSLELAKELIKNGNFISYSTLVCF 179
           V++PVVIHAR   E +  IL+ D       ++HC+ G   LA+ ++ NG  IS    V +
Sbjct: 140 VSRPVVIHARDAAEETIAILEGDGFRGYPVLWHCFGGDAPLAERIVDNGWHISIPGPVTY 199

Query: 180 SEHH--KNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVI 218
             +   +  V  + ++ +++ETD PYL+P+  +G++NEP  V+
Sbjct: 200 PANTALREAVHVIPVDRLMLETDCPYLTPVPYRGKRNEPAYVV 242