Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 262 a.a., Mg-dependent Dnase TatD from Caulobacter crescentus NA1000

 Score = 82.4 bits (202), Expect = 8e-21
 Identities = 57/233 (24%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQMVTSGTNLGSCRRAVEL--KEKYGIYVTLGY 66
           IDSH ++      + ++ ++ RA E  + M+ +  +  S   AV      +  I+ T+G 
Sbjct: 6   IDSHVNLHAPQFAEDKDAVIARAREAGIAMMVTICDKVSSFEAVHAIAMAEPDIWCTVGT 65

Query: 67  HPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLSKEV 124
           HP     +          +  + + ++ +GE GLDF  D    E Q  +F++    ++E 
Sbjct: 66  HPHEAKENPGLTAATLVELAQRPR-VVGIGECGLDFHYDLSPREVQAEVFRQHCVAARES 124

Query: 125 NKPVVIHARGMEERSYDILKNDVIS-----MYHCYSGSLELAKELIKNGNFISYSTLVCF 179
             P+V+H R  +    +IL+ +  +     + HCY+   ELA      G + S S +  F
Sbjct: 125 GLPLVVHTREADAVMGEILEAEHAAGPFKILMHCYTSGAELAARAAALGAWFSVSGIATF 184

Query: 180 --SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELK 228
             +E  + +++++  + ++VETD PYL+P+  +G +NEP  + ++ + + E++
Sbjct: 185 KAAEEVRAVIRDMPADRIIVETDCPYLAPVPMRGRRNEPAFLPHIYDKLAEIR 237