Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 258 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 23/227 (10%)

Query: 9   IDSHCHV--EDKS------LNKYREDIVKRAFEKKVQMVTSGTNLGSCRRAVELKEKYGI 60
           ID+H H+  E+ S      + + R+  V R +   +   T    L  C    +       
Sbjct: 3   IDTHSHLFLEEFSDDLPQVMERARQAGVSRIYMPNIDSTTIEPMLSVCADYPDF-----C 57

Query: 61  YVTLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLD--FDAENIERQENIFKKFI 118
           Y  +G HP  VN        +           +A+GEIGLD  +D   +  Q  +F+K I
Sbjct: 58  YPMIGLHPTSVNESYRQELSIVRERLEAPNNFVAIGEIGLDLYWDKTFLNEQLYVFEKQI 117

Query: 119 NLSKEVNKPVVIHARGMEERSYDIL---KNDVIS-MYHCYSGSLELAKELIKNGNF-ISY 173
             + E   P+V+H+R   +  Y ++   KN  ++ ++H ++G+ E A  L++ G F +  
Sbjct: 118 EWALEYKLPIVVHSREAFDYIYKVMEPYKNTALTGIFHSFTGNAEEAARLLEFGGFMLGI 177

Query: 174 STLVCFSEHH-KNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNV 217
           + +V F +    + +  + LE +V+ETDSPYL+P   +G++NE  NV
Sbjct: 178 NGVVTFKKSSLPDTLLTVPLERIVLETDSPYLTPAPNRGKRNESANV 224