Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 267 a.a., Sec-independent protein translocase TatD (RefSeq) from Shewanella sp. ANA-3

 Score = 73.6 bits (179), Expect = 4e-18
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 21/262 (8%)

Query: 8   YIDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYG--IYVTL 64
           YID   ++   +L      IV+ A ++ V  ++  G++L     A++L ++Y   +Y T 
Sbjct: 4   YIDIAVNLLGSALEPDIAQIVQAAADQGVSPLIVIGSDLTESAAAIQLCQQYPNQLYCTA 63

Query: 65  GYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENIER--QENIFKKFINLSK 122
           G HP   + +  A  K      S+  +++AVGE GLD++ +   R  Q   F   + L+ 
Sbjct: 64  GVHPHHAS-EWQADSKQLQTTLSQAPQVVAVGECGLDYNRDFSPRPAQRQAFIDQLELAV 122

Query: 123 EVNKPVVIHARGMEERSYDILKNDVI----SMYHCYSGSLELAKELIKNGNFISYSTLVC 178
           E+ KPV++H R        I+K        ++ HC++G+    +  I+    +  +  VC
Sbjct: 123 ELKKPVLMHERDAHADFLSIVKEYRPHLSGALLHCFTGTHPQMEAYIELDLHLGITGWVC 182

Query: 179 FSEHHKNL---VKNLGLENVVVETDSPYLSP------IKGEKNEPKNVINVIETIWELKK 229
                + L   V  +  E +++ETDSPYL P       K  KN+P+ +  + + I  L+ 
Sbjct: 183 DERRGQELAELVPFIPKERLLIETDSPYLLPRSMRPKPKSSKNKPEYLPYIAQYIANLRG 242

Query: 230 DEYSMDEITKIIYNNTKRLYRI 251
           +  +  E  K  Y N+   + +
Sbjct: 243 ENAA--EFAKQCYQNSLAFFNL 262