Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 266 a.a., TatD family hydrolase (RefSeq) from Shewanella sp. ANA-3

 Score =  103 bits (257), Expect = 4e-27
 Identities = 76/259 (29%), Positives = 138/259 (53%), Gaps = 24/259 (9%)

Query: 9   IDSHCHVE-------DKSLNKYREDIVKRAFEKKVQMVTSGTNLGSCRRAVELKEKYGIY 61
           IDSHCH++        ++L     +   R  +  + +        S R  V   E+  ++
Sbjct: 7   IDSHCHLDRLKAAPDQQTLELILANAKARGVDYMLCVNVRQQGFESMRDKVAAFEQ--VF 64

Query: 62  VTLGYHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFIN 119
           ++ G HP  V  D   +E++  F  + + +++A+GE GLD+    E    Q+  F++ I 
Sbjct: 65  LSSGVHPLDVK-DGLDVEQIRRF--AMDPKVVAIGETGLDYFYADETKALQQQCFEQQIA 121

Query: 120 LSKEVNKPVVIHARGMEERSYDILK----NDVISMYHCYSGSLELAKELIKNGNFISYST 175
           L+ EVNKP+++H R   E + ++LK    + V  + HC++ + E+AK  I  G +IS S 
Sbjct: 122 LAVEVNKPLIVHTRDAREDTINMLKAGQADKVGGVLHCFTENWEMAKAAIDLGFYISVSG 181

Query: 176 LVCFSE--HHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDE 231
           +V F      + +++ +  E ++VETDSPYL+PI  +G++N+P  V +V E + EL+ + 
Sbjct: 182 IVTFKNAGELRTVIRKVPKERLLVETDSPYLAPIPHRGQENQPAYVRDVAEFVAELRGER 241

Query: 232 YSMDEITKIIYNNTKRLYR 250
           Y  +E+ +    N   L++
Sbjct: 242 Y--EELAEYTSENFFNLFK 258