Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 255 a.a., TatD-related deoxyribonuclease (RefSeq) from Shewanella sp. ANA-3

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 14/253 (5%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKYGIYVTLGYH 67
           +D+H H++    +  RE +V+R  +  +  ++  G +     + + + E+Y  Y  LG H
Sbjct: 3   LDTHAHLDFAEFDSDREQVVQRMRQAGIDNLIIPGVSPLHWEKQLAIAEQYQCYFALGIH 62

Query: 68  PGRVNADDNAIEKVYNFIRSKEKE---ILAVGEIGLD-FDAENIERQENIFKKFINLSKE 123
           P     D +       F  S+ +E    +A+GE GLD   A+N  +Q   F   + L+ E
Sbjct: 63  PWFCPEDVDKAISALTFQVSQLRECPRFVAIGECGLDKLYADNWSKQLAFFDAQLTLANE 122

Query: 124 VNKPVVIHARGMEERSYDILKNDVI---SMYHCYSGSLELAKELIKNGNFISYSTLVCFS 180
           +N PV++HA    +     LK   +    + H +SGS ++A E IK G  +    LV   
Sbjct: 123 LNLPVIVHAVKAHQEVLSHLKRHKLPKGGVIHAFSGSPDIAAEYIKLGFKLGIGGLVMNP 182

Query: 181 EHHKNL--VKNLGLENVVVETDSPYLSP--IKGEKNEPKNVINVIETIWELKKDEYSMDE 236
              K L  V  L L++ ++ETDSP ++P  +  ++N+P N +  I+ I  L+K    +  
Sbjct: 183 NAKKLLKTVSELPLDSFLLETDSPAMTPQNVTEKRNQPANAVLFIDKIATLQKKSSVL-- 240

Query: 237 ITKIIYNNTKRLY 249
           I++ + +N  +L+
Sbjct: 241 ISEHLVSNAMQLF 253