Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 563 a.a., cell division protein FtsY (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (364), Expect = 6e-39
 Identities = 91/290 (31%), Positives = 162/290 (55%), Gaps = 15/290 (5%)

Query: 21  FVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAIDEAPPKGLSKKEHIVKIVYD 80
           F  KK+  E+ +++++ L+ +DV V+    + K +     + A  + L   E + +++ +
Sbjct: 279 FRGKKIDDELFEELEEQLLIADVGVETTSKLIKSLT----EHASRRQLKDAEALYELLRE 334

Query: 81  ELVKLLGETTQKLELDPSKKS-VILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAADVY 139
           E+ + L   +  L  + ++   VIL++G+ G GKTT+  KLA+  Q +G    L A D +
Sbjct: 335 EMQRTLEPVSVPLVPENAQGPYVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTF 394

Query: 140 RPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME--KLKKVDVIIIDTAGRHKEEE 197
           R AA +QL+   ++ N+P+    T   +   +  + ++  K K VDV+I DTAGR + + 
Sbjct: 395 RAAAVEQLQVWGQRNNIPVVAQHTGADS-ASVLFDALQSAKAKGVDVLICDTAGRLQNKN 453

Query: 198 GLLAEMKEM------KDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDG 251
            L+ E+K++       D + P+E++L +D + GQ A +QAK F+E+V   G I +TKLDG
Sbjct: 454 HLMEELKKVVRVMKKLDESAPHEVMLTLDASTGQNAISQAKLFQEAVGVTG-ISITKLDG 512

Query: 252 SAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLDS 301
           +AKGG   +   +   PI++IG GE +D+L  F+ + FI  +      D+
Sbjct: 513 TAKGGVIFAIADKFGIPIRYIGVGEQIDDLRVFNARDFIDALFSQEKTDN 562