Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 506 a.a., Cell division transporter substrate-binding protein FtsY (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (351), Expect = 2e-37
 Identities = 86/287 (29%), Positives = 158/287 (55%), Gaps = 19/287 (6%)

Query: 23  DKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAIDEAPPKGLSKKEHIVKIVYDEL 82
           ++KL  + ++D++  LI +D+ V+    +++ + ++   +    G   + H      DE+
Sbjct: 230 ERKLDDQALEDLEDLLITADIGVETAGKLTRSLAKERFGKNVT-GEEIRGHFA----DEI 284

Query: 83  VKLLGETTQKLELDPS-KKSVILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAADVYRP 141
             +LG   + LE+D S K  V+L++G+ GSGKTT+  K+A  +  +  R  L A D +R 
Sbjct: 285 ATILGPVARPLEIDGSLKPHVVLVVGVNGSGKTTTIGKIANQLVHENKRVLLAAGDTFRA 344

Query: 142 AAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLKK--VDVIIIDTAGRHKEEEGL 199
           AA +QL+   ++    +   +T   +   +  + ++K +    DV++IDTAGR   +  L
Sbjct: 345 AAVEQLRIWGDRTGCEVIARDTGADS-AGLAFDALQKARAEGYDVLLIDTAGRLHNKTEL 403

Query: 200 LAEMKEMK------DLTNPNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSA 253
           + E+K++       D   P+  + V+D T+GQ A  Q K F+E ++++  +++TKLDG+A
Sbjct: 404 MEELKKVVRVLRKIDPAVPHTCLQVLDATVGQNAHQQVKVFQE-MTDVSGLVMTKLDGTA 462

Query: 254 KGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLD 300
           KGG  ++   +   P+ ++G GEG+D+L  F  + F     GL DLD
Sbjct: 463 KGGVVVALADKFGLPVHYVGIGEGIDDLRPFSARDFAR---GLMDLD 506