Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 451 a.a., signal recognition particle protein from Dechlorosoma suillum PS

 Score =  244 bits (624), Expect = 3e-69
 Identities = 149/449 (33%), Positives = 255/449 (56%), Gaps = 9/449 (2%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           MLD L Q L+  +  L+    + +  + + +++++ AL+++DV + ++ +    ++ KA+
Sbjct: 1   MLDNLTQRLAGVMKTLRGEARLTESNISDALREVRLALLEADVALPVIKDFIAAVKEKAL 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
            E     L+  + ++ +V+ E+ +L+G     L L     +VIL+ G+QG+GKTT+  KL
Sbjct: 61  GEEVIGSLTPGQALIGVVHKEMTQLMGGANAALNLATQPPAVILMAGLQGAGKTTTVGKL 120

Query: 121 ARYIQKKGLRPGL-IAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKL 179
           A+ +++   +  L ++ DVYRPAA +QLK ++ +  V  F   T  K P  I    ++  
Sbjct: 121 AKLLKETQKKKVLVVSCDVYRPAAIEQLKTVAAQACVDFFPSSTEEK-PEAIALAAIDWA 179

Query: 180 KK--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKES 237
           +K   DV+++DTAGR   +E ++AE+K++     P E + V+D  LGQ A N A++F E+
Sbjct: 180 RKHYHDVLLVDTAGRLAIDEAMMAEIKQLHAAIKPVETLFVVDAMLGQDAVNTARSFNEA 239

Query: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   G +++TKLDG A+GG ALS       P+KF+G GE +  LE F P++  SR+LG+G
Sbjct: 240 LPLTG-VVLTKLDGDARGGAALSVRHVTGKPVKFVGVGEKLSGLEAFHPERMASRVLGMG 298

Query: 298 DLDSLLEKTEDIMDESTEESIDSILK-GK-FTLIELYAQLETISKMGPMKQILSMIPGMG 355
           D+ SL+E+    +DE    ++   LK GK F L +   Q+  +  MG M  ++  +P   
Sbjct: 299 DILSLVEEARKGVDEEKALAMAKKLKSGKGFDLNDFKDQIAQMRNMGGMAALMDKLPAQF 358

Query: 356 GNMPKEAAQLTEAK-LKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLL 414
                +     E K ++R + +++SMT  E+  PELIK SR +RIA GAGV+ +E+  LL
Sbjct: 359 AQAAGQLQGGAEDKAVRRIEGIINSMTPAERAKPELIKASRKRRIATGAGVQVQEVNRLL 418

Query: 415 KYYSTTKNAFGNLKRGKMPK-MGGQMGQI 442
             +  T+    +  +G + K M G  G +
Sbjct: 419 NQFEQTQKMMKSFAKGGLSKLMRGMKGMM 447