Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 334 a.a., signal recognition particle-docking protein FtsY from Dechlorosoma suillum PS

 Score =  164 bits (415), Expect = 4e-45
 Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 12/297 (4%)

Query: 5   LGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAIDEAP 64
           L +  S    KLK+  F   K+  E++++++  L+ SDV +    ++  E++R+A  +  
Sbjct: 43  LSRTRSQLGGKLKSV-FARGKVDDELLEELETLLLTSDVGMDATMHLLDELKRRAKQDK- 100

Query: 65  PKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLARYI 124
              L     I + + D L ++L      L++D  K  VI++ G+ G+GKTTS  KLA+Y 
Sbjct: 101 ---LEGAAAIQQALADTLAQMLAPLEAPLQVDSHKPFVIMIAGVNGAGKTTSIGKLAKYF 157

Query: 125 QKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLKKVDV 184
           Q +G    L A D +R AA +QL    E+ NV +   E+     V        K + +DV
Sbjct: 158 QSQGKSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQESGDPAAVVFDAIAAAKARGIDV 217

Query: 185 IIIDTAGRHKEEEGLLAEMKEMK------DLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
           ++ DTAGR   +  L+ E+ +++      D T P+E++LV+D  +GQ A  Q KAF +S+
Sbjct: 218 VLADTAGRLPTQLHLMEEIAKVRRVIQKADPTGPHEVMLVLDANIGQNALAQVKAFDKSI 277

Query: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILG 295
           +  G +L TKLDG+AKGG   +   +   P++FIG GEG+D+L  F  + F+  + G
Sbjct: 278 NVTGLVL-TKLDGTAKGGVIAAIARQCPKPVRFIGVGEGIDDLRPFVARDFVDALFG 333