Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 464 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (311), Expect = 6e-33
 Identities = 81/274 (29%), Positives = 144/274 (52%), Gaps = 16/274 (5%)

Query: 32  KDIQKALIQSDVNVKLVFNMSKEIERKAIDEAPPKGLSKKEHIVKIVYDELVKLLGETTQ 91
           +++++ LI +DV     F  + ++  +  + A   G         ++ +EL  +     +
Sbjct: 190 EELEEILIMADVG----FEPAMQLTGRLKERARKAGTDDPAAFRDLLREELQDIFRAPRR 245

Query: 92  KLELDPSKKSVILLIGIQGSGKTTSAAKLARYIQKKGLRPGLIAADVYRPAAYQQLKQLS 151
              + P +  V+L+IG+ G GKTT+ AKLA   + +G +  + AAD +R AA +QL+  +
Sbjct: 246 IAAVTPPE--VVLMIGVNGVGKTTTIAKLAHRARMQGKKVLIAAADTFRAAAIEQLEVWA 303

Query: 152 EKINVPLFGDETRTKTPVEITKEGMEKLKK--VDVIIIDTAGRHKEEEGLLAEMKEMKDL 209
           +++    F  ++    P  +  E M+       D++ +DTAGR   +  L+ E+ +++ +
Sbjct: 304 KRVGAD-FHAKSAGSDPAAVAFEAMDVALAGGYDIVFVDTAGRLHTKVNLMEELHKIRRI 362

Query: 210 TN------PNEIILVIDGTLGQQAKNQAKAFKESVSEIGSILVTKLDGSAKGGGALSAVA 263
                   P+  ILVID T GQ A +Q K F E+   +  I++TKLDG+AKGG  ++   
Sbjct: 363 LERKHPGAPHRSILVIDATTGQNALSQTKLFNEACG-VDEIVLTKLDGTAKGGIVVAVAM 421

Query: 264 EINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   PI F+G GE +++L  FD   F   +LG+G
Sbjct: 422 QFGIPITFVGLGEKMEDLRPFDGGDFALALLGVG 455