Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 455 a.a., signal recognition particle protein from Klebsiella michiganensis M5al

 Score =  281 bits (720), Expect = 2e-80
 Identities = 163/449 (36%), Positives = 263/449 (58%), Gaps = 9/449 (2%)

Query: 1   MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
           M D L   LS  L  +     + +  +K+ +++++ AL+++DV + +V +    ++  A+
Sbjct: 1   MFDNLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFINRVKESAV 60

Query: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
                K L+  +  VKIV +ELV  +GE  Q L+L     +V+L+ G+QG+GKTTS AKL
Sbjct: 61  GHEVNKSLTPGQEFVKIVRNELVAAMGEENQALDLAAQPPAVVLMAGLQGAGKTTSVAKL 120

Query: 121 ARYIQKKGLRPGL-IAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGME-- 177
            +++++K  +  L ++ADVYRPAA +QL+ L+E+++V  F  +   K PV+I    ++  
Sbjct: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVSVDFFPSDVGQK-PVDIVNAALKEA 179

Query: 178 KLKKVDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKES 237
           KLK  DV+++DTAGR   +E ++ E+K++    NP E + V+D   GQ A N AKAF E+
Sbjct: 180 KLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASLNPVETLFVVDAMTGQDAANTAKAFNEA 239

Query: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
           +   G +++TK+DG A+GG ALS       PIKF+G GE  + LE F P +  SRILG+G
Sbjct: 240 LPLTG-VVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMG 298

Query: 298 DLDSLLEKTEDIMDESTEESIDSILK--GKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
           D+ SL+E  E  +D +  E + S LK    F L +   QL  +  MG M  ++  +PGMG
Sbjct: 299 DVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLTDFLEQLRQMKNMGGMASLMGKLPGMG 358

Query: 356 GNMPKEAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLK 415
                  +Q+ +  L R + +++SMT++E+  PE+IK SR +RIA G G++ +++  LLK
Sbjct: 359 QIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLK 418

Query: 416 YYSTTKNAFGNLKR--GKMPKMGGQMGQI 442
            +   +     +K   G M  M G  G +
Sbjct: 419 QFDDMQRMMKKMKSKGGMMKMMRGMKGMM 447