Pairwise Alignments

Query, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

Subject, 386 a.a., cell division protein FtsY from Burkholderia phytofirmans PsJN

 Score =  141 bits (355), Expect = 4e-38
 Identities = 94/300 (31%), Positives = 158/300 (52%), Gaps = 12/300 (4%)

Query: 2   LDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAID 61
           L +L   LS   + L    FV  K+ +++ ++++ AL+ SD  V     + + +  K   
Sbjct: 92  LTRLKTGLSKTSSNL-TGIFVGTKIDEDLYEELETALLMSDAGVDATEFLLEALREKVRA 150

Query: 62  EAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKLA 121
           E     L   + +   +   LV LL    + L L  ++  V+++ G+ G+GKTTS  KLA
Sbjct: 151 ER----LVDPQQVKTALRTLLVDLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLA 206

Query: 122 RYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLKK 181
           +++Q       L A D +R AA +QL    ++ NV +   E+     V     G  + +K
Sbjct: 207 KHLQSFDQSVLLAAGDTFRAAAREQLAIWGQRNNVTVVSQESGDPAAVIFDAVGAARARK 266

Query: 182 VDVIIIDTAGRHKEEEGLLAEMKEMKDLTN------PNEIILVIDGTLGQQAKNQAKAFK 235
           +DV++ DTAGR   +  L+ E++++K +        P+E++LVID   GQ A  Q KAF 
Sbjct: 267 IDVMMADTAGRLPTQLHLMEELRKVKRVIGKAQDGAPHEVLLVIDANTGQNALAQVKAFD 326

Query: 236 ESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILG 295
           +++   G ++VTKLDG+AKGG   +   +   P+ FIG GE V++L+ F  ++F   +LG
Sbjct: 327 DALGLTG-LIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFSAEEFSDALLG 385