Pairwise Alignments

Query, 240 a.a., 50S ribosomal protein L2 from Methanococcus maripaludis S2

Subject, 287 a.a., 50S ribosomal protein L2 from Synechococcus elongatus PCC 7942

 Score =  127 bits (319), Expect = 2e-34
 Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 12/223 (5%)

Query: 9   NRGRGTPKYRSPTHKRKGAVKYRSYDEMEKDGKILGTVIDILHDPGRSAPVAKVKFANDE 68
           NRG  T ++R   HKR     YR  D       + G ++ I +DP R+A ++ V + + E
Sbjct: 45  NRGVITCRHRGGGHKRL----YRIIDFKRDKRNVPGKIVSIEYDPNRNARISLVYYEDGE 100

Query: 69  ERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGGC 128
           +R +L P G+ VG  I  G    I+ GN +PL  IP G  V+N+E + G GG++VR+ G 
Sbjct: 101 KRYILTPAGVHVGTPIIAGDETPIEVGNAMPLQNIPLGTTVHNVELVAGKGGQIVRAAGA 160

Query: 129 YAHVISHDVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKAV 188
            A V++ +     ++LPS   +++   C AT+G V     +     KAG+K   L  +  
Sbjct: 161 SAQVVAKEGNYVALKLPSTEVRLVRKECYATIGAVGNAEVRNTSLGKAGRK-RWLGRR-- 217

Query: 189 AWPKVRGVAMNAVDHPYGGGR-HQHIGKPSSVSRHTSP--GRK 228
             P+VRG  MN VDHP+GGG     IG+   V+    P  GRK
Sbjct: 218 --PEVRGSVMNPVDHPHGGGEGRAPIGRSGPVTPWGKPALGRK 258