Pairwise Alignments

Query, 334 a.a., 50S ribosomal protein L3 from Methanococcus maripaludis S2

Subject, 209 a.a., 50S ribosomal protein L3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)

Query: 179 LGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIG-PW 237
           +G+ L +S +F AGE +     + GKG+QG ++RW        H  + V R  GSIG   
Sbjct: 95  VGQELTVS-LFAAGEKVKVTGTSIGKGYQGVMRRWNFAGSKDTHGCEKVHRSGGSIGNNT 153

Query: 238 RPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTV 297
            P  V     + G  G  + T  N  I+ + +E                 +  ++VKG V
Sbjct: 154 FPGHVFKGKKMAGHWGDERVTVKNLEIVDIRAE-----------------DNVILVKGAV 196

Query: 298 QGPAKRLVVLR 308
            GP   LV++R
Sbjct: 197 PGPKNGLVLVR 207