Pairwise Alignments

Query, 323 a.a., methanogenesis marker 2 protein from Methanococcus maripaludis S2

Subject, 338 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  146 bits (368), Expect = 8e-40
 Identities = 89/324 (27%), Positives = 163/324 (50%), Gaps = 8/324 (2%)

Query: 2   DLSKLADELRNFEGVTRKKEIKNVVNNFNFQEDYDFDIVVDFGDDAAIIGIDDENAVLLA 61
           DL+ LA +L+   G+  K++I+    +   +      +    GDDAA++     N +L A
Sbjct: 9   DLAALAAQLQTLAGLQGKRDIQAAAASLPHRPFPKLGLAAALGDDAALLPAT-ANRLLFA 67

Query: 62  ADGIWGKLLEADPFWAGYCAVLVNANDIAAMGGKSIGMTNIIGIKDCDKGKDLLKGLKEG 121
            +GI   L+  DP++AG+  VLVN +DIAAMGG+ I + N +  +D      +  GL+  
Sbjct: 68  CEGIHPDLVAEDPWFAGWSGVLVNLSDIAAMGGRPIAVVNSLWSRDRQHADQVFAGLQFA 127

Query: 122 VSKFGIPVLGGHTHPDAQCNVLDISITGIVKRENVLRSDAAKTGDKIVFAYDLDGKIHEK 181
             KFGIP++GGH++  +  + L +++ G V   +VL + +A+ GD+     + DG+ +  
Sbjct: 128 AEKFGIPIVGGHSNLQSPYSALSVAVLGQV-GPHVLSARSAQAGDRCYLLINRDGQFYRH 186

Query: 182 FNLNWDTTSMKSKKYVRDQLKVLEIIGEEHLANACKDISNPGGLGTLGMLLEVSKKGAMV 241
           +   WD  +  + + +R   +++  + +  L +A KD+S  G +GT  M  E S  G  +
Sbjct: 187 YPF-WDAATGTAPEQLRRHWELMAQLADAGLVSAAKDVSMGGLIGTAVMFAETSGAGLDL 245

Query: 242 DVSKIPVPEDISLNHWLKMYPGSGFVFTAPENKTKELIEKLEFAGIESAVC---GEVKND 298
            + ++  P  +S + WL  +P  GF+   PE      ++++  A      C   G   N 
Sbjct: 246 HLDRLSYPAGVSRDRWLTCFPSFGFLLAVPEACCDRFLQRV--ATEPDLTCDHLGSFTNT 303

Query: 299 KKFMITDGTEKTMFFDFDKEYICG 322
            +  + D   +  F+D  ++ + G
Sbjct: 304 GQVRLCDRQAQVCFWDCQEQSLMG 327