Pairwise Alignments

Query, 323 a.a., methanogenesis marker 2 protein from Methanococcus maripaludis S2

Subject, 318 a.a., thiamin-monophosphate kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 40/304 (13%)

Query: 20  KEIKNVVNNFNFQEDYDFDIVVDFGDDAAIIGIDDENAVLLAADGIWGKLL---EADPFW 76
           KE + +   FN +     D+ +  GDD A++   +  ++ ++ D +   +    +  P  
Sbjct: 2   KEFQLIECYFNHRGPTRRDVKLSIGDDCALVQPAENKSIAISCDTLVENVHFFPDIPPQA 61

Query: 77  AGYCAVLVNANDIAAMGGKSIGMTNIIGIKDCDKG--KDLLKGLKEGVSKFGIPVLGGHT 134
            GY A+ VN +D+AAMG +   MT  + + + ++       +GL E    +GI ++GG T
Sbjct: 62  LGYKALAVNLSDLAAMGAEPAWMTLALTLPEVNETWLSGFSEGLFEAADYYGIALIGGDT 121

Query: 135 HPDAQCNVLDISITGIVKRENVLRSDAAKTGDKIVFAYDLDGKI---------------H 179
               +   ++I++ G V +   L    AK GD I     L                   H
Sbjct: 122 TRGPRA--INITVHGQVPQGKALTRHGAKAGDWIYVTGTLGDSALGLDLIRCVQHARAEH 179

Query: 180 EKFNLNWDTTSMKSKKYVRDQLKVLEIIGEEHLANACKDISNPGGLGTLGMLLEVSKKGA 239
           ++F +N         ++ R   +VL       LA++  D+S+ G +  +G +L+ SK GA
Sbjct: 180 KEFLIN---------RHYRPTPRVLAGQSLRSLASSAIDLSD-GFISDIGHILKASKVGA 229

Query: 240 MVDVSKIP--------VPEDISLNHWLKMYPGSGFVFTAPENKTKELIEKLEFAGIESAV 291
           +VDV  IP        V E+ +L + L        +FT PE +   L   L  AG +   
Sbjct: 230 VVDVGAIPLSRAMQDTVSEEHALGYALTGGEDYELLFTVPEAQKGALETALSHAGTKFVR 289

Query: 292 CGEV 295
            G++
Sbjct: 290 VGQI 293