Pairwise Alignments

Query, 416 a.a., LL-diaminopimelate aminotransferase from Methanococcus maripaludis S2

Subject, 405 a.a., Uncharacterized PLP-dependent aminotransferase YfdZ from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (434), Expect = 3e-47
 Identities = 120/405 (29%), Positives = 195/405 (48%), Gaps = 27/405 (6%)

Query: 10  AERIGGKSFGKEDVI--YKFEKIKRAKQAAKLKYPDMELIDMGVGEPDEMADESVVEVLC 67
           AE+   + F + D +  Y F      K AA+ +  D  +ID+ +G PD      +VE L 
Sbjct: 2   AEQGSPRRFARIDRLPPYVFNITAELKMAARRRGED--IIDLSMGNPDGATPPHIVEKLV 59

Query: 68  EEAKKHVNRGYSDN-GVQALKDEIPIYLEKIFGVKDLDPVNEVVHSIGSKPALAYITSVF 126
             A++    GYS + G+  L+  I  + +  + V D+DP  E + +IGSK  LA++    
Sbjct: 60  TVAQREDTHGYSTSKGIPRLRRAISRWYKDRYEV-DIDPETEAIVTIGSKEGLAHLMLAT 118

Query: 127 INPGDVTLMTVPGYPVTATHTKWYGGSVETLPLLEKNNFLPELDAISKEVRENAKILYLN 186
           ++ GD  L+  P YP+        G  V ++PL+   +F  EL+   +      K++ L 
Sbjct: 119 LDQGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVPGVDFFAELERAIRGSIPKPKMMILG 178

Query: 187 YPNNPTGAQATKKFYKEAVDFAFENDLIVIQDAAYAALTY-GDKPLSFLSVKDAKEVGVE 245
           +P+NPT       F++  +  A + D++VI D AYA + Y G K  S + V  AK++ VE
Sbjct: 179 FPSNPTAQCVELDFFERVIALAKQYDVLVIHDLAYADIVYDGWKAPSIMQVPGAKDIAVE 238

Query: 246 IHSFSKAYNMTGWRLAFVAGNELIVRGFAAVKDNYDSGQFIPIQKAGIHCLR-HPEITEK 304
             + SK+YNM GWR+ F+ GN  +V   A +K  +D G F P+Q A I  L    +    
Sbjct: 239 FFTLSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRD 298

Query: 305 TRAKYERRLSKMVKILKEAGFNAKMPGGTFYLYVKAPIGTKDGAKFANAEEFSQFMIKEK 364
              +Y +R + +VK L E G+  + P  + Y++ K P    +      + EF++ ++ E 
Sbjct: 299 IAEQYRQRRNVLVKGLHELGWMVENPKASMYVWAKIP----EAYAHLGSLEFAKKLLAEA 354

Query: 365 LISTVPWDDAGNF----VRMAACFEAFKDGEISIEEEDRILNEVK 405
            +   P    G +    VR A            IE +DRI   V+
Sbjct: 355 KVCVSPGVGFGEYGDDHVRFAL-----------IENQDRIRQAVR 388