Pairwise Alignments

Query, 416 a.a., LL-diaminopimelate aminotransferase from Methanococcus maripaludis S2

Subject, 388 a.a., aminotransferase, classes I and II (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  236 bits (602), Expect = 9e-67
 Identities = 126/323 (39%), Positives = 189/323 (58%), Gaps = 7/323 (2%)

Query: 25  YKFEKIKRAKQAAKLKYPDMELIDMGVGEPDEMADESVVEVLCEEAKKHVNRGY-SDNGV 83
           Y F  I + K  A++    +++I +G+G+PD      ++E + E   +  N  Y S  G+
Sbjct: 16  YLFAGIDKVK--AEVAARGVDIISLGIGDPDMATPGFIIEAMKEAIARPANHQYPSYVGM 73

Query: 84  QALKDEIPIYLEKIFGVKDLDPVNEVVHSIGSKPALAYITSVFINPGDVTLMTVPGYPVT 143
            A + E+  + ++ FGV  LDP  EV+  IGSK  +A+    FINPGD+ L+  P YPV 
Sbjct: 74  LAFRQEVANWYDRRFGVS-LDPATEVIGLIGSKEGIAHFPFAFINPGDLVLVCTPNYPVY 132

Query: 144 ATHTKWYGGSVETLPLLEKNNFLPELDAISKEVRENAKILYLNYPNNPTGAQATKKFYKE 203
              T + GG V+ +PLLE+N+FLP+LDAI ++  + AK++++NYPNNPT A A   FY++
Sbjct: 133 HIATGFAGGEVQFVPLLEENDFLPDLDAIPEDTWKRAKMIFVNYPNNPTAATAPLGFYEK 192

Query: 204 AVDFAFENDLIVIQDAAYAALTYGD--KPLSFLSVKDAKEVGVEIHSFSKAYNMTGWRLA 261
            VD     D+I+  D AY  + Y +  +P S LSV  AK+V +E HS SK YNMTGWR+ 
Sbjct: 193 LVDICRRFDVIIAHDTAYTEIYYDEDNRPPSILSVPGAKDVAIEFHSLSKTYNMTGWRVG 252

Query: 262 FVAGNELIVRGFAAVKDNYDSGQFIPIQKAGIHCLRH-PEITEKTRAKYERRLSKMVKIL 320
              GN  +V G   +K+N DSG F  +Q+A I  LR   +   + R  Y +R   ++  L
Sbjct: 253 MAVGNPTLVAGLGKIKENMDSGIFQAVQEASIVALRDGDDFCRELRGIYRQRRDTVINAL 312

Query: 321 KEAGFNAKMPGGTFYLYVKAPIG 343
            +AG   ++P  TFY++ + P G
Sbjct: 313 HKAGIQCRVPQATFYVWARVPQG 335