Pairwise Alignments

Query, 416 a.a., LL-diaminopimelate aminotransferase from Methanococcus maripaludis S2

Subject, 386 a.a., aspartate aminotransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (269), Expect = 4e-28
 Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 22/354 (6%)

Query: 46  LIDMGVGEPDEMADESVVEVLCEEAKKHVNRGYSDNGVQALKDEIPIYLEKIFGVKDLDP 105
           +ID  +G+PD    + + E  C+   +   R   + G+  L++ I    +  + + + +P
Sbjct: 29  VIDFTLGDPDIHPHDKIKEAGCKAILEGRTRYSPNAGLLELREIISSRYKLQYNI-EYNP 87

Query: 106 VNEVVHSIGSKPALAYITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVETLPLLEKNNF 165
            NE++ ++G    L       +N GD  ++  P +           G       +  N+ 
Sbjct: 88  TNEIMVTVGGMEGLYLTLLAILNRGDEVIIPAPYWINYVQMVCMCSGEPIITAPVSTNDL 147

Query: 166 LPELDAISKEVRENAKILYLNYPNNPTGAQATKKFYKEAVDFAFENDLIVIQDAAYAALT 225
              ++ I K +    K + LN P+NP+G   +    ++    A ENDLIVI D  Y  L 
Sbjct: 148 SISIENIRKAITPKTKAIILNTPSNPSGRIISDDSIQQIAQIAIENDLIVITDEVYKTLL 207

Query: 226 YGDKPL-SFLSVKDAKEVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFAAVKDNYDSGQ 284
           Y +    S ++    KE  V I+S SK + MTGWRL ++A    ++      ++N  +  
Sbjct: 208 YDNAHFKSIVTCDKMKERTVVINSLSKEFCMTGWRLGYIAAPSELISVMTMFQENIAACA 267

Query: 285 FIPIQKAGIHCLRHPE------ITEKTRAKYERRLSKMVKILKEAGFNAKMPGGTFYLYV 338
            +P Q A I  LR+ E      I E T     RR   + ++ K        P GTFY  +
Sbjct: 268 PLPSQYAAIEALRNSEKYSAGMIEEFTL----RRNVLLEEVAKIKTITVDAPQGTFYAML 323

Query: 339 KAPIGTKDGAKFANAEEFSQFMIKEKLISTVP----WDDAGNFVRMAACFEAFK 388
                   G K   +EEF+  +++++ ++ VP     D   +F+R+A   + +K
Sbjct: 324 NI---KSTGLK---SEEFAYALLEKEQVAVVPGITYGDCCEDFIRIAFTLDIYK 371