Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 225 a.a., ribonuclease 3 from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (291), Expect = 3e-31
 Identities = 79/227 (34%), Positives = 126/227 (55%), Gaps = 19/227 (8%)

Query: 6   KLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYLFKK- 64
           KL SKL   F +  +   A  H S        N + NERLE+LGD++L  +I++ L+++ 
Sbjct: 7   KLTSKLGYTFKETELLNLALTHRS-------ANGKHNERLEFLGDSILSFVIADELYRRF 59

Query: 65  ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVFEAFI 124
             ++EG+MS++RA  V  + L    ++    +Y+ LG GE+ S G+ + +I++D  EA I
Sbjct: 60  PKVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAII 119

Query: 125 AAIYLDQGLDSVKKFVYEFIIPIIEE-----SSKELFIDYKTKLQEFPELINKSIN-YVN 178
            AIYLD  L++ +  V E+    +EE     S K    D KT+LQEF +   K +  Y  
Sbjct: 120 GAIYLDSDLETARSIVLEWYHGRLEEIKPGASQK----DPKTRLQEFLQGRRKPLPVYTV 175

Query: 179 LEETGEAHDKKFVIAVK-SGRKILGKGIGKSKKEAEMKAAKNALLKL 224
               GEAH+++F +A + +G      G G S+++AE  AA+ AL +L
Sbjct: 176 TNIKGEAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQL 222