Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 247 a.a., RNAse III from Synechococcus elongatus PCC 7942

 Score = 69.3 bits (168), Expect = 6e-17
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 26/238 (10%)

Query: 1   MKNFEKLLSKLDIQFN---DLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLII 57
           +K  ++LL+KL +      D     RA  H S   +         +RLE+LGDAVL L I
Sbjct: 17  LKQLQRLLTKLPLTIAPELDWQQIDRALTHPSAAEDHY-------DRLEFLGDAVLRLAI 69

Query: 58  SEYLFKK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIV 116
           +++L +   +LS G+ S LR++   +  L   A        + +GK   N +   + + +
Sbjct: 70  ADFLDRHYPDLSVGDCSALRSELGSDRTLAAIAASYNLERVLRVGKTAANDRA-GQQSRL 128

Query: 117 SDVFEAFIAAIYLDQ-GLDSVKKFVYEFIIPIIEESSKELFID-----YKTKLQEFPELI 170
           ++ FEA + A+YL Q  LD ++     ++ P +++ +  +  D     YK  LQE+    
Sbjct: 129 AEAFEALLGALYLSQRNLDPIR----SWLDPHLQQRATAMLQDPTRGNYKAALQEWTLQR 184

Query: 171 NKSINYVNLEETGEAHDKKFVIAVK---SGRKILGKGIGKSKKEAEMKAAKNALLKLE 225
            + +     E+  +A       A +    G K LG G+G+S K A+  AA  A   LE
Sbjct: 185 YQELPEYRTEQRSDACGDPAAFAAEVWFRGEK-LGSGVGRSIKAAQQAAALVACTALE 241