Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 238 a.a., ribonuclease III from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 7/218 (3%)

Query: 6   KLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYLFKK- 64
           +L + +  +F +     RA  HSS     ++    + +RLE+LGD VL L ++E LF+  
Sbjct: 13  RLEAAIGYRFAEKERLDRALTHSS----ARSGRAINYQRLEFLGDRVLGLCVAELLFQTF 68

Query: 65  ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVFEAFI 124
            + +EGE+S    + V   +    A +L  + ++  G       G +   + +DV E+ I
Sbjct: 69  TDANEGELSVRLNQLVSAESCAKVADELSLHEFIRTGSDVKKITGKHMMNVRADVVESLI 128

Query: 125 AAIYLDQGLDSVKKFVYEFIIPIIEESSKELFIDYKTKLQEFPEL-INKSINYVNLEETG 183
           AAIYLD GLD+ ++FV E        S+     D KT+LQE+       +  Y   + +G
Sbjct: 129 AAIYLDGGLDAARRFVLEHWTH-RAASADGARRDAKTELQEWAHAKFGVAPKYRTDDRSG 187

Query: 184 EAHDKKFVIAVKSGRKILGKGIGKSKKEAEMKAAKNAL 221
             HD +F + V+        G+ +SK+ AE  AA   L
Sbjct: 188 PDHDPRFTVTVEVDGIAPETGVDRSKRGAEQVAAMKLL 225