Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 228 a.a., ribonuclease 3 from Phaeobacter inhibens DSM 17395

 Score = 95.9 bits (237), Expect = 6e-25
 Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 13/232 (5%)

Query: 2   KNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYL 61
           K+     +++   F+   +  RA  H+S      + N +DN+RLE+LGD VL L+++  L
Sbjct: 5   KDMRAFETRIGYSFSQPALLVRALTHASV----SSPNRQDNQRLEFLGDRVLGLVMATAL 60

Query: 62  FKKENLS-EGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVF 120
              +  + EG+++      V +      A+ +     + LG+ E  S G  K A++ D  
Sbjct: 61  LDTDKAATEGQLAPRFNALVRKETCADVARDIDLGAVLKLGRSETMSGGRRKLALLGDAM 120

Query: 121 EAFIAAIYLDQGLDSVKKFVYEF---IIPIIEESSKELFIDYKTKLQEFPELINKS-INY 176
           EA IAA+Y D G D+ ++ +       I  +E  ++    D KT LQEF +   +    Y
Sbjct: 121 EAVIAAVYKDGGFDAAQELILRLWGNRIGRVEADAR----DPKTTLQEFAQARGEQPPAY 176

Query: 177 VNLEETGEAHDKKFVIAVKSGRKILGKGIGKSKKEAEMKAAKNALLKLEKNK 228
           V +E TG  H  +F I+V+      G+    SK++AE  AAK  L +LE+ K
Sbjct: 177 VLVERTGPDHQPEFTISVQLQDGTEGRATAGSKRQAEQAAAKFLLARLEQEK 228