Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 225 a.a., ribonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (288), Expect = 7e-31
 Identities = 75/232 (32%), Positives = 130/232 (56%), Gaps = 16/232 (6%)

Query: 1   MKNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEY 60
           +KN  +L   L  QF  + + ++A  H S  ++        NERLE+LGD++L ++IS+ 
Sbjct: 4   IKNLPRLGRILGYQFQQIALLEQALTHRSAASKH-------NERLEFLGDSILSIVISDA 56

Query: 61  LFKK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDV 119
           L+ +    +EG++S++RA  VC   L   AK+ K  +Y+ LG GE+ S G+ + +I++D 
Sbjct: 57  LYHQFPKATEGDLSRMRATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADA 116

Query: 120 FEAFIAAIYLDQGLDSVKKFV---YEFIIPIIEESSKELFIDYKTKLQEFPELINKSIN- 175
            EA I AIYLD  +++ +  V   Y+  + +IE  +++   D KT LQE  +   + +  
Sbjct: 117 MEAIIGAIYLDADIETCRTLVLNWYKSRLAVIEPVNQK---DPKTLLQEHLQGFKQPLPV 173

Query: 176 YVNLEETGEAHDKKFVIAVKSGR-KILGKGIGKSKKEAEMKAAKNALLKLEK 226
           Y  +  +GEAH + F +  K  + K    G+  S+++AE  AA   L +++K
Sbjct: 174 YTVVNISGEAHAQTFTVECKVEQLKEAVIGVANSRRKAEQIAAAEVLERIKK 225