Pairwise Alignments

Query, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

Subject, 226 a.a., ribonuclease III (RefSeq) from Shewanella sp. ANA-3

 Score =  114 bits (285), Expect = 2e-30
 Identities = 73/232 (31%), Positives = 126/232 (54%), Gaps = 15/232 (6%)

Query: 1   MKNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEY 60
           +KN  +L   L  +F ++++  +A  H S  N+        NERLE+LGD++L ++IS+ 
Sbjct: 4   IKNLPRLCRTLGYEFKNIDLLTQALTHRSAANKH-------NERLEFLGDSILSIVISDA 56

Query: 61  LFKK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDV 119
           L+ +    +EG++S++RA  V    L   AK  K  +Y+ LG GE+ S G+ + +I++D 
Sbjct: 57  LYHQFPKATEGDLSRMRATLVRGDTLTLIAKAFKLGDYLFLGPGELKSGGFRRESILADA 116

Query: 120 FEAFIAAIYLDQGLDSVKKFVYEFIIPIIEESSKEL-FIDYKTKLQEFPELINKSI-NYV 177
            EA I AIYLD  L+  +K +  +    + E    +   D KT LQE+ + + K + +Y 
Sbjct: 117 VEAIIGAIYLDSDLEVCRKLLLHWYAERLAEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQ 176

Query: 178 NLEETGEAHDKKFVIAVK---SGRKILGKGIGKSKKEAEMKAAKNALLKLEK 226
            +   G+AHD+ F +  +       ++  G+  S+++AE  AA   L  L+K
Sbjct: 177 VINIEGDAHDQTFTVECRIDDLSESVI--GVASSRRKAEQIAAAQVLELLKK 226