Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 480 a.a., Peptidase U62, modulator of DNA gyrase (NCBI) from Rhodospirillum rubrum S1H

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 98/417 (23%), Positives = 171/417 (41%), Gaps = 42/417 (10%)

Query: 8   LIDRIMEISEKKGFETEVFISKGKNFSSELDGENLDSIEESDDFGIGVRVIKDKKVGFAY 67
           ++D  ++ S+    + E+F+   ++ S  LD   +         G G+R +  + VGFA+
Sbjct: 25  MVDHALDGSD----DGELFLEYRQSESFSLDDGRIRGASFDTTQGFGLRAVSGEAVGFAH 80

Query: 68  SSKNDIDVVNKAMENL---------IYDSDTSFSNPEKYTHPKGMLYDDVKKLTEKELID 118
           +S  D   + +A+E +               + +N   YT    +  D +   T+ E + 
Sbjct: 81  ASTLDQGALKRAVETVRAVRGGASGTVALPPAATNRALYTPDNPL--DRIDFTTKVETLS 138

Query: 119 ALFEMKDILKENKITTVSGGVSNSYDYSRIINSNGVDVEEENTYY----SASIAGINN-- 172
           A+ +     ++ K+  V   ++ S+   RI+ + G DV +         S  + G N   
Sbjct: 139 AI-DAHARSRDPKVVQVMASLTGSWQAVRILGAGGRDVSDLRPLVRLNVSVVVEGANGRR 197

Query: 173 --------GETAYDYLTKNNIFD--VKELAENVVEFLKNPNAIKTEFEGNIMLDQRALNS 222
                   G   YD L + + +   V+E     +  L++ +A   E    ++L       
Sbjct: 198 ETGSHGLGGRVGYDGLLEESTWKAAVEEALRQALVNLESIDAPAGEMP--VVLGPGWPGI 255

Query: 223 LLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGTRDYSLYSAVVDGEGTKTQ 282
           LL   +      +  ++  S   + L   V    +TI DDGT      S  +D EGT T 
Sbjct: 256 LLHEAIGHGLEGDGNRKGTSAFSEGLGKRVAAPGVTIVDDGTIADRRGSLSIDDEGTPTA 315

Query: 283 KTTLIENGVLKNYLYDIKRANIEGKKSTGNASR-GYSSLPSVGPTNIVI-----EPVEKQ 336
           +T +IE+G+L  YL D   A + G K TGN  R  Y+  P    TN  +     +P    
Sbjct: 316 RTVIIEDGILTGYLQDRLNARLMGMKPTGNGRRQSYAHHPLPRMTNTFMLAGADDPAAIL 375

Query: 337 ENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGE-KTPVKKGLLSGNIFEIL 392
            ++   LY     G    +  +G F    S +Y+++ G    PVK   L GN  ++L
Sbjct: 376 GSVKRGLYA-VNFGGGQVDTTSGKFVFSASEAYLIENGRIGAPVKGATLIGNGPDVL 431