Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 482 a.a., peptidase U62, modulator of DNA gyrase (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 8/138 (5%)

Query: 257 ITIEDDGTRDYSLYSAVVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASR- 315
           +T+ DDGT +    S  +D EG  TQKT LI++G+LK Y+ D     + G+ STGN  R 
Sbjct: 295 VTVVDDGTLENRRGSLSIDDEGVPTQKTVLIQDGILKGYMQDKLNGRLMGQASTGNGRRE 354

Query: 316 GYSSLPSVGPTNIVIE-----PVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYI 370
            Y+ LP    TN  +E     P +  +++D+ +Y     G    +  +G F    S +Y+
Sbjct: 355 SYAHLPMPRMTNTYMEAGDSSPEDIIKSVDKGIYAPN-FGGGQVDITSGKFVFSASEAYL 413

Query: 371 MKKGEKTPVKKG-LLSGN 387
           ++KGE T   KG  L GN
Sbjct: 414 IEKGEITQAIKGATLIGN 431



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 52 GIGVRVIKDKKVGFAYSSKNDIDVVNKAME 81
          G+GVR I  +K GFAY+ +     ++ A+E
Sbjct: 65 GVGVRAISGEKTGFAYADEITPAALSAAVE 94