Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 482 a.a., tldD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 97/370 (26%), Positives = 148/370 (40%), Gaps = 37/370 (10%)

Query: 52  GIGVRVIKDKKVGFAYSSKNDIDVVNKAMENLI-YDSDTSFSNPEKYTHPKGM-LYD--- 106
           G+GVR I  +K GFAY+       +  A+E      S    +  + +   K + LYD   
Sbjct: 65  GVGVRAISGEKTGFAYADDITPAALTAAVEAARGIASAGEQTQVQAFKRQKALALYDSLD 124

Query: 107 ------DVKKLTEKELIDALFEMKDI-----------LKENKITTVSGGVSNSYDYSRII 149
                 +VKK+   +  DA     D            + E  +   S G   + D   ++
Sbjct: 125 PIAAMEEVKKINLLKEADAFIRSLDSRIIQVVVSLAGVHEEILVAASDGTLAA-DIRPLV 183

Query: 150 NSNGVDVEEENTYYSASIAGINNGETAYDYLTKNNIFDVKEL----AENVVEFLKNPNAI 205
             N   + EEN       AG   G   Y  L  N+   +        E V +   N NAI
Sbjct: 184 RFNCSVILEENGKRERGGAG-GGGRHDYSVLMVNDDTGLPMCFAFAREAVRQAQVNLNAI 242

Query: 206 KTEF-EGNIMLDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGT 264
                E  ++L       LL   +      +  ++  S     +   V  + +T+ DDGT
Sbjct: 243 DAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGQQVASKLVTVVDDGT 302

Query: 265 RDYSLYSAVVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASR-GYSSLPSV 323
                 S  +D EG +TQ+T LIE+G+LK YL D   A + G   TGN  R  Y+ LP  
Sbjct: 303 LANRRGSLSIDDEGVQTQRTVLIEDGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 362

Query: 324 GPTNIVI-----EPVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEKTP 378
             TN  +     EP +  +++ + +Y     G    +  +G F    S +Y+++ GE T 
Sbjct: 363 RMTNTYMTSGESEPSDIIKSVKKGIYAPN-FGGGQVDITSGKFVFSASEAYLIENGEVTQ 421

Query: 379 VKKG-LLSGN 387
             KG  L GN
Sbjct: 422 AIKGATLIGN 431