Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 447 a.a., pmba protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 8e-14
 Identities = 101/430 (23%), Positives = 177/430 (41%), Gaps = 55/430 (12%)

Query: 1   METDLQYLIDRI---MEISEKKGFET-EVFISKGKNFSSELDGENLDSIEESDDFGIGVR 56
           ++++L  L D +   +E + K G    EV ISK +  S     + ++++E + D  +G+ 
Sbjct: 6   IDSELTALKDAVAVALEYANKLGTNAAEVAISKQQGLSVSTRLKEVETVEFNKDGALGIT 65

Query: 57  VIKDKKVGFAYSSK---NDIDVVNKAMENLI-YDSDTSFSNPE------------KYTHP 100
           V +D   G + +S      I +  KA +++  Y S   FS               K  +P
Sbjct: 66  VYRDGCKGSSSTSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIRDLKLYYP 125

Query: 101 KGMLYDDVKKLT---EKELIDA--LFEMKDILKENKITTV-----SGGVSNSYDYSRIIN 150
           + +  D++ +L    E   +DA       D    N  T+V     S G  N Y  SR   
Sbjct: 126 QEISADELAQLAIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSL 185

Query: 151 SNGVDVEEENTYYSASIAGINNGETAYDYLTKNNIFDVK-------ELAENVVEFLKNPN 203
           S  V  E+ N           N +  YDY       ++        + AE  V  L    
Sbjct: 186 SCSVIGEDRN----------GNMQRDYDYTIARKFNEMLSPESVGLKTAEKTVSRLGARK 235

Query: 204 AIKTEFEGNIMLDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDG 263
              T     I+L       L+ + LI A +  ++ R  S L D +   +F +  +IE+  
Sbjct: 236 IATTRLP--ILLAPEIATGLIGH-LIGAISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQP 292

Query: 264 TRDYSLYSAVVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASRGYSSLPSV 323
               +L SA  D EG  TQ   +I+ G+L+ YL     A      +TG+A   Y+   ++
Sbjct: 293 HLLGALASANYDSEGVATQDRRIIDRGMLETYLLTSYSARKLSLPNTGHAGGIYNW--TL 350

Query: 324 GPTNIVIEPVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEKTPVKKGL 383
             T    + + K   +   L +  ++G    N +TGD+S   +  Y+     + PV++  
Sbjct: 351 AHTGQGFDELVK--GMGTGLIVTEVMG-QGVNMVTGDYSRGAAGFYVENGEVQFPVEEIT 407

Query: 384 LSGNIFEILK 393
           ++GN+ ++ +
Sbjct: 408 IAGNLKDMFR 417