Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 448 a.a., Predicted Zn-dependent proteases and their inactivated homologs from Sphingomonas koreensis DSMZ 15582

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 213 IMLDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGTRDYSLYSA 272
           ++LD R   SLL + L  A +   + R  S L D +   VF   I I+DD  R   L S 
Sbjct: 236 VVLDPRVGTSLLGH-LSGAISGSAITRQTSFLLDAMGTQVFAPGIRIQDDPHRPRGLRSR 294

Query: 273 VVDGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASRGYSSLPSVGPTNIVIE- 331
             DGEG       LIE+G L+ +L D   A   G + TG+ASRG    P VGP+N+ +E 
Sbjct: 295 PFDGEGLPVSPVALIEDGKLETWLLDSAAARQLGLEPTGHASRGIGGAPGVGPSNLFMEA 354

Query: 332 ---PVEKQ-ENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEKT-PVKKGLLSG 386
              PVE    +I   +Y+  LIG    N ITGD+S   +  ++++ GE T PV +  ++G
Sbjct: 355 GKLPVETLIADISYGVYVTELIG-QGVNLITGDYS-RGAAGFLIENGEITRPVSEFTVAG 412

Query: 387 NIFEILKTAVPLDRVEQRGKLISPPLLFNG 416
            +  +    VP + +E R  +  P L  +G
Sbjct: 413 TLQAMFAALVPANDLEFRYGINVPTLRIDG 442