Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 439 a.a., putative modulator of DNA gyrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 92/414 (22%), Positives = 182/414 (43%), Gaps = 45/414 (10%)

Query: 13  MEISEKKGFET-EVFISKGKNFSSELDGENLDSIEESDDFGIGVRVIKDKKVGFAYSSKN 71
           M+ + K G +  +V +    N S EL    +D ++++ + G+ + +  D + G   +++ 
Sbjct: 14  MDYALKNGCQAAKVLLYSSSNTSFELRDAKMDRLQQASEGGLSLSLYVDGRYGSISTNRL 73

Query: 72  DIDVVNKAMEN-------LIYDSDTSFSNPEKYTH---PKGMLYD----DVKKLTEKELI 117
           +   +   ++N       L  D     ++P +Y     P   LYD     +    + E+ 
Sbjct: 74  NRKELETFIKNGIDSTRYLAKDEARVLADPSRYYKGGKPDLKLYDAKFASLNPDDKIEMA 133

Query: 118 DALFEMKDILKENKITTVSGGVSNSYDYSRIINSNGVDVEEENTYYSASIAGINNGE--- 174
            A+ E + + K+ +I +V     +  D++  + SNG + E ++T+YS S      GE   
Sbjct: 134 KAVAE-EALGKDERIISVGSSYGDGEDFAYRLISNGFEGETKSTWYSLSADITIRGEGEA 192

Query: 175 --TAYDYLTKNNIFDV--KELAENVVEFLKNPNAIKTEFEGNIMLDQRALNS--LLSYTL 228
             +AY Y +   + D+  K + +  +E +      K    G   +    +NS  LLS  +
Sbjct: 193 RPSAYWYESSLYMNDLIKKGIGQKALERVLRKLGQKKVQSGKYTMVVDPMNSSRLLS-PM 251

Query: 229 IPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGTRDYSLYSAVVDGEGTKTQKTTLIE 288
           I A N   +Q+  S L +KL   +  + +T+ D+     +  +   D EG  T++ ++ +
Sbjct: 252 ISALNGSALQQKNSFLLNKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFD 311

Query: 289 NGVLKNYLYDIKRANIEGKKSTGNASRGYSSLPSVGPTNIVIEPVEKQ-----ENIDEYL 343
            GVL  Y  D   A   G   T +           G + +V+E  +K        +++ +
Sbjct: 312 KGVLNTYFIDTYNAKKMGVDPTIS-----------GSSILVMETGDKNLDGLIAGVEKGI 360

Query: 344 YINTLIGTHTANPITGDFSVEISNSYIMKKGEKT-PVKKGLLSGNIFEILKTAV 396
            +    G +  N  TGDFS  I   ++++ G+ T PV +  ++GN+  +  + V
Sbjct: 361 LVTGFNGGNN-NSSTGDFSYGI-EGFLIENGKLTQPVSEMNVTGNLITLWNSLV 412