Pairwise Alignments

Query, 420 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 513 a.a., putative modulator of DNA gyrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 99/427 (23%), Positives = 183/427 (42%), Gaps = 59/427 (13%)

Query: 2   ETDLQYLIDRIMEISEKKGFETEVFISKGKNFSSELDGENLDSIEESDDFGIGVRVIKDK 61
           E DL+ ++   +E   K G   ++F     + S  L    +++   + D+G+GVRV+   
Sbjct: 54  EADLKKVLAAALE---KGGDYADLFFEHTISNSIRLMDGAVNNSYSNIDYGVGVRVLTGD 110

Query: 62  KVGFAYSSKNDIDVVNKAMENLIYDSDTS--FSNPEKYTHPKGMLYDDVKK--------- 110
           + G+AY       V N  +E+++  + T+   ++  K   P  +   ++KK         
Sbjct: 111 QSGYAY-------VENITVEDMLKAARTAARIASANKGNKPLNLTEKELKKNYYTVASPW 163

Query: 111 --LTEKELIDALFEMKDIL--KENKITTVSGGVSNSYDYSRIINSNGVDVEEENTYYSAS 166
             ++ K+ +  L ++ D +   + ++  V    S++  +    NS GV   +     +  
Sbjct: 164 EEVSLKDKMPYLQKLNDRIFALDKRVHKVQASQSDTTSHIFFCNSEGVMFYDYRPMVTLG 223

Query: 167 IAGI--NNGETAYDYLTKNNIFDVKELAENVVEFLKNPNAIKTEF----------EGNIM 214
              I   +G+T   Y  +        L++ VV+ +      +T            E  ++
Sbjct: 224 AVCIMEEDGKTENGYAARAYRRGFDFLSDEVVDVIAREAVDQTSLLFKAIKPKGGEMPVV 283

Query: 215 LDQRALNSLLSYTLIPAFNAENVQRNRSVLKDKLECDVFGENITIEDDGTRDYSLYSAVV 274
           +       LL   +   F A+  ++N S+  D+L   V  E+I + DDGT  ++  S   
Sbjct: 284 MGAGGSGILLHEAIGHTFEADFNRKNVSIFADQLNKKVCNEHINVVDDGTIPFNRGSVNF 343

Query: 275 DGEGTKTQKTTLIENGVLKNYLYDIKRANIEGKKSTGNASR-------------GYSSLP 321
           D EG + QKT LI++GVL +YL+D   A   G + TGN  R              Y    
Sbjct: 344 DDEGAEGQKTYLIKDGVLTSYLHDRISAKHYGVEPTGNGRRESFRNMPIPRMRATYMEAG 403

Query: 322 SVGPTNIVIEPVEKQENIDEYLYINTLIGTHTANPITGDFSVEISNSYIMKKGEKT-PVK 380
           +V  ++I I  V+K   +D +      IG        GDF+  + + Y+++ G+ T P+K
Sbjct: 404 NVSESDI-ISSVKKGIFVDNFTNGQVQIG-------AGDFTFFVKSGYMIEDGKLTQPIK 455

Query: 381 KGLLSGN 387
              + GN
Sbjct: 456 DINIIGN 462