Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 304 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 60/274 (21%), Positives = 118/274 (43%), Gaps = 27/274 (9%)

Query: 11  IPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKIS-ESSI 69
           + + L +L+L   +  GL   +D +GGT I +      D++ ++EQL  S    +   S 
Sbjct: 17  VTLFLTVLALFSWATKGLNYGLDFTGGTLIELTYERPADVTKVREQLATSGYSDAIVQSF 76

Query: 70  GTFVVIKSGLETDVDSVRAVVKEFF------NVEDLSELSYTEKQIGSVLSSKFWEEGMK 123
           G    +   +  +   +   V E        N   +  + +   Q+G  L  +     + 
Sbjct: 77  GATTDLLVRMPGEDPQLGHQVAEALQKAGGDNPAQVKRVEFVGPQVGEELRDQGGLGMLM 136

Query: 124 AVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIAALLMLV 183
           A+G   I++A      F+     GA++ +   D+ + VG +S F I      +AA+L ++
Sbjct: 137 ALGGILIYLAFR----FQWKFAVGAIV-SLIHDVIVTVGILSFFQITFDLTVLAAVLAII 191

Query: 184 GYSVDTDIMLTTRVLKR----RSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTFVVP 239
           GYS++  I++  RV +     R  +L E I   + T  T+  T   +++ L  +   ++ 
Sbjct: 192 GYSLNDTIVVFDRVRENFRVLRKASLIENI--NISTTQTLLRTMATSISTLLAIAALLIF 249

Query: 240 AADVLANIAAVLLIGL---------IGDLMLTWM 264
             D L   +  L +G+         I +++L W+
Sbjct: 250 GGDNLFGFSIALFVGVLAGTYSSIYIANVVLIWL 283