Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 372 a.a., protein translocase subunit SecF from Rhodopseudomonas palustris CGA009

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 20/259 (7%)

Query: 11  IPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANT-DLSVLKEQLPD---SEVKISE 66
           I  +L++ ++TL   +GL   ID  GGT + + A +   D++ +++ L      +V++ +
Sbjct: 49  ISAVLSIAAITLFFTHGLNFGIDFRGGTLLEVRAHSGAADIAGMRDTLSKLSLGDVQLQQ 108

Query: 67  SSIGTFVVIKSGLETDVDSVRAVVKEFFNVEDLSELSYTEKQI-GSVLSSKFWEEGMKAV 125
                 V+I+   +   D  + V  +         + Y   ++ G  +SS+    GM  +
Sbjct: 109 FGGPAEVLIRIAEQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSELLAFGMLGL 168

Query: 126 GFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIAALLMLVGY 185
             A + + + ++  F      GA+I A   D+ + +G MS+  +     +IAALL ++GY
Sbjct: 169 MVAILGILVYLWFRFEWQFALGAMI-ANVHDIVLTIGFMSISQVDFDLTSIAALLTILGY 227

Query: 186 SVDTDIMLTTRV---LKR-----RSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTFV 237
           S++  +++  R+   L+R         L+E I   +   I   +T   A+  L L     
Sbjct: 228 SLNDTVVIYDRIREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLF---- 283

Query: 238 VPAADVLANIAAVLLIGLI 256
                 + +  AV++ G++
Sbjct: 284 --GGHAIHSFTAVMMFGVV 300