Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella loihica PV-4

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 22/262 (8%)

Query: 8   LTIIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKI--- 64
           ++ + +IL + SL  ++VNG+   +D +GGT + +      DL+ L+  L   E      
Sbjct: 20  ISALSLILVIGSLASLAVNGINWGLDFTGGTVVEMEFKNPVDLNQLRAALTSDETDGAVV 79

Query: 65  ----SESSIGTFVVIKSGLETDVDSVRAVVKEFFNVE---DLSELSYTEKQIGSVLSSKF 117
               S   +   + +K G+++D+  V  V++    V+       + +   Q+G  L+   
Sbjct: 80  QNFGSSRDVLIRLPVKEGVKSDLQ-VAHVMEAAAKVDPGVSQKRVEFVGPQVGKELA--- 135

Query: 118 WEEGMKAVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIA 177
            E+G  AV  A I + I V   F   +  G+V  A A D+ I +G  SLF +      +A
Sbjct: 136 -EQGGLAVLVALICILIYVSFRFEWRLALGSVA-ALAHDVIITLGVFSLFQLEFDLTVLA 193

Query: 178 ALLMLVGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFAMAVLYLV 233
            +L +VGYS++  I++  R+    LK R GT +E +  ++    TMS T I     L +V
Sbjct: 194 GVLTVVGYSLNDTIVVFDRIRENFLKMRKGTPEEVVNNSITQ--TMSRTIITTGTTLVVV 251

Query: 234 VTFVVPAADVLANIAAVLLIGL 255
           V   +    ++   A  LL+G+
Sbjct: 252 VALFLKGGTMIHGFATALLMGI 273