Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 315 a.a., protein-export membrane protein SecF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 16/259 (6%)

Query: 8   LTIIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKI--- 64
           ++I+  +L L S+ L++  GL   +D +GGT + +      DL+  + QL   E      
Sbjct: 20  VSIMSAVLVLGSIVLLATKGLNWGLDFTGGTVVEMSFSTPVDLNQFRSQLTTPETSSAVV 79

Query: 65  ----SESSIGTFVVIKSGLETDVDSVRAVVKEFFNVEDLSELSYTEKQIGSVLSSKFWEE 120
               S   +   + +K G+ +DV  V  V  +F    D + +    + +G  +  +  E+
Sbjct: 80  QNYGSSRDVLVRLPVKEGISSDVQVVEIV--KFAQQLDPNVVQKRVEFVGPQVGKELAEQ 137

Query: 121 GMKAVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIAALL 180
           G  AV  A I + I +   F   + +GAV  A A D+ + +G  SL  +      +A +L
Sbjct: 138 GGLAVLVALICIMIYIAFRFEWRLATGAV-AALAHDVMVTLGVFSLTQMEFDLTVLAGVL 196

Query: 181 MLVGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTF 236
            +VGYS++  I++  RV    LK R    +E +  ++    TMS T I     L +VV  
Sbjct: 197 TVVGYSLNDTIVVFDRVRENFLKMRKSEPEEVVNVSITQ--TMSRTIITMGTTLVVVVAL 254

Query: 237 VVPAADVLANIAAVLLIGL 255
            +    ++   AA LL+G+
Sbjct: 255 FLSGGSMIHGFAAALLLGI 273