Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score = 72.8 bits (177), Expect = 9e-18
 Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 20/261 (7%)

Query: 8   LTIIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKI--- 64
           ++I+  IL   SL  ++  G+   +D +GGT + +      DL+VL+ +L   E+     
Sbjct: 20  ISIMSAILVFGSLVSLATKGINWGLDFTGGTVVEMEFTQPVDLNVLRTKLSAPELDGAVV 79

Query: 65  ----SESSIGTFVVIKSGLETDVD--SVRAVVKEFFNVEDLSELSYTEKQIGSVLSSKFW 118
               S   +   + +K G+ +DV   SV A  ++         + +   Q+G  L+    
Sbjct: 80  QNFGSSRDVLVRLSVKEGVSSDVQVKSVMAAAQQVDAGVQQKRVEFVGPQVGKELA---- 135

Query: 119 EEGMKAVGFAFIFMAIVVYAIFRTPVPSGAVILAAASDMAIAVGGMSLFNIPISTATIAA 178
           E+G  AV  A I + I V   F   +  G+V  A A D+ + +G  S+F +      +A 
Sbjct: 136 EQGGLAVLVALICIMIYVSFRFEWRLAFGSVA-ALAHDVIVTLGVFSVFQLEFDLTVLAG 194

Query: 179 LLMLVGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVV 234
           +L +VGYS++  I++  R+    LK R    +E +  ++    TMS T I     L  VV
Sbjct: 195 VLTVVGYSLNDTIVVFDRIRENFLKMRKSEPEEVVNVSITQ--TMSRTIITTGTTLVTVV 252

Query: 235 TFVVPAADVLANIAAVLLIGL 255
              +    ++   A  LL+G+
Sbjct: 253 ALFLKGGTMIHGFATALLLGI 273