Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 488 a.a., SecD export membrane protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 35/329 (10%)

Query: 59  ILTSRLNTNGLSDVRIYPRGSDEIVIEIPESADLERIQKILTQQGVFT--------AVID 110
           +L  RL   GLS++R+  R    I++ +P   D ER++ +L +    +          ID
Sbjct: 154 VLRQRLREAGLSEIRLERRSDRRILVALPGLDDSERVRDLLWRPARLSIRAANGEGGTID 213

Query: 111 NQTAYTGQDVSYVEEPGMTASGYGVGFKLTLDGAQKFADVAYGKGG-YPVELYMDEKAIS 169
                + Q      +P ++    GV       G ++   +  G+GG   +E  +D +A++
Sbjct: 214 GDRLTSAQATVQNGKPLISLRFDGV-------GERRIIQMRGGEGGERGLEATIDGEAVA 266

Query: 170 APLLSADLADGNIHQNQVITVAGSNPTEEDIDEAWVIYTALKSGSLPVKVHIEYISSVSP 229
             LL      G I     + + G+  T    D A +    L+ G+LP    I    +V P
Sbjct: 267 VRLLRQP-GSGGIG----LLLDGAFSTRAAQDLALM----LRVGALPTPFRIVEERTVGP 317

Query: 230 TLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFASLIDWKL 289
           +LG++ +    +A     +AV   +   Y    +   I +       L+ G  S +   L
Sbjct: 318 SLGADRVAAGALASAAGALAVTVFLIAVYGLFGVFATIALG--LNFCLLFGMLSGLGATL 375

Query: 290 DLASIAGIIAAVGTGVDHQIVITDETISGEAK---KVTKSIK----RAFFIIFGAAATTI 342
            L  IAGI   +G  VD  ++I  E I  EA+    V ++++    +AF  +  A   T+
Sbjct: 376 TLPGIAGIALTIGMAVDASVLIF-ERIGEEARAGLAVDEALRAGFGKAFSAVLDANILTL 434

Query: 343 AAMLPLFVMGIGMLKGFAITTIAGVLMGI 371
                LF +G G ++GFA+T   G +  +
Sbjct: 435 GVGALLFWLGGGPVRGFAVTLTLGAVSAL 463