Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 315 a.a., protein-export membrane protein, SecD/SecF family from Dechlorosoma suillum PS

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 17/174 (9%)

Query: 224 ISSVSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFAS 283
           +  V P +G E  +   +A +   I +   ++FR++  +  +  +I    +V++ILGF +
Sbjct: 122 VEFVGPQVGKELAENGAMALLVVIIGIVIYLAFRFEW-RFSVSAIIANLHDVIIILGFFA 180

Query: 284 LIDWKLDLASIAGIIAAVGTGVDHQIVITDETISGEAK------------KVTKSIKRAF 331
              W+  L+ +A ++A +G  V+  +V+ D       K             +T +I R  
Sbjct: 181 FFQWEFSLSVLAAVLAVLGYSVNESVVVFDRVRETFRKARGMTTPQVLDHAITSTISRT- 239

Query: 332 FIIFGAAATTIAAMLPLFVMGIGMLKGFAITTIAGVLMGISISRPAFSRIIQYV 385
            I  G+    + +ML   V G   L  FA+    G+L GI  S    S ++ ++
Sbjct: 240 IITHGSTQMMVLSML---VFGGETLHYFAMALTIGILFGIYSSVLVASPLVMWL 290