Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 323 a.a., protein translocase subunit SecF from Klebsiella michiganensis M5al

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 37/163 (22%), Positives = 86/163 (52%), Gaps = 11/163 (6%)

Query: 221 IEYISSVSPTLGSEFIKGSVIAGIFAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILG 280
           ++ I  V P++G++  +   +A I A + +   + FR++  ++   ++I    +V++ +G
Sbjct: 128 VKRIEFVGPSVGADLAQTGALALIAALVCILIYVGFRFEW-RLAAGVVIALAHDVVITMG 186

Query: 281 FASLIDWKLDLASIAGIIAAVGTGVDHQIVITDETISGEAKKVTK---------SIKRAF 331
             SL+  ++DL  +A +++ +G  ++  IV++D  I    +K+ +         S+ +  
Sbjct: 187 VLSLLHIEIDLTIVASLMSVIGYSLNDSIVVSDR-IRENFRKIRRGTPYEIFNVSLTQTL 245

Query: 332 FIIFGAAATTIAAMLPLFVMGIGMLKGFAITTIAGVLMGISIS 374
                 + TT+  +L L++ G  +L GF++T + GV +G + S
Sbjct: 246 HRTLITSGTTLMVILMLYLFGGPILAGFSLTMLIGVSIGTASS 288



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 16  VLASLLLIAFKGISFGVDLSGGSTIVLQTESELSESEMTTVNEILTSRLNTNGLSDVRIY 75
           ++ S+++I  +G ++G+D +GG+ I +  E  +   +       +   L   G  + ++ 
Sbjct: 34  LILSIIIIGVRGFNWGLDFTGGTVIEITLEKPVDMDQ-------VRQSLQKAGFEEPQLQ 86

Query: 76  PRGSD-EIVIEIPESADLERIQKI 98
             GS  +I++ +P   D    Q++
Sbjct: 87  NFGSSRDIMVRMPPVHDANGSQEL 110