Pairwise Alignments

Query, 388 a.a., preprotein translocase subunit SecD from Methanococcus maripaludis S2

Subject, 624 a.a., preprotein translocase subunit SecD (RefSeq) from Shewanella sp. ANA-3

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 84/372 (22%), Positives = 148/372 (39%), Gaps = 49/372 (13%)

Query: 37  GSTIVLQTESELSESEMTTVN--EILTSRLNTNGLSDVRIYPRGSDEIVIEIPESADLER 94
           G  + L  E ++    +T     +I+ SR+   G+++  +  +G   I IE+P   D   
Sbjct: 234 GLVVKLAQEEQIKLRNLTVQQNLQIMRSRIEELGITEALVQRQGEHRIRIELPGVQDPAA 293

Query: 95  IQKIL--TQQGVFTAVIDN-------------------QTAYTGQDVSYVEEPGMTASGY 133
            + ++  T    F  V ++                   +T   G D        +   G 
Sbjct: 294 AKNVIGATASLAFFEVKESGSVNAQVLKDKSGNPVYVARTPVLGGDHIVDARANIGEMGM 353

Query: 134 G-VGFKLTLDGAQKFADVAYGKGGYPV-----ELYMDEKAISAP---LLSADLADGNIHQ 184
             V   L   G QK ++ +    G P+     E   DE+  +     ++S       +  
Sbjct: 354 AEVNIHLDRIGGQKMSEFSRANIGKPMATSYSEYSRDEQGKAKQTQEIISVATIQSQLGD 413

Query: 185 NQVITVAGSNPTEEDIDEAWVIYTALKSGSLPVKVHIEYISSVSPTLGSEFIKGSVIAGI 244
              IT AG+        EA  +   L++GS+   V I    ++ PTLG+E I+    A  
Sbjct: 414 RFRITGAGT------YQEAQQLALLLRAGSMTAPVTIVEERTIGPTLGAENIQNGFAALG 467

Query: 245 FAFIAVAAVISFRYKNPKIVLPILITGFSEVLLILGFASLIDWK-LDLASIAGIIAAVGT 303
                    ++  Y+    V  + +   + ++++ G  +LI    L L  IAG++  VG 
Sbjct: 468 LGMGITLLFMALWYRRLGWVANVAL--IANMVILFGLLALIPGAVLTLPGIAGLVLTVGM 525

Query: 304 GVDHQIVITDETISGEAKK-------VTKSIKRAFFIIFGAAATTIAAMLPLFVMGIGML 356
            VD  ++I  E I  + K+       +      AF  IF A  TT+   + L+ +G G +
Sbjct: 526 AVDTNVLIF-ERIKDKLKEGRSFALAIDTGFDSAFSTIFDANFTTMITAVVLYSIGNGPI 584

Query: 357 KGFAITTIAGVL 368
           +GFA+T   G+L
Sbjct: 585 QGFALTLGLGLL 596