Pairwise Alignments

Query, 224 a.a., hydrogenase nickel incorporation protein HypB from Methanococcus maripaludis S2

Subject, 258 a.a., hydrogenase accessory protein HypB (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 1e-38
 Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 2/209 (0%)

Query: 7   LNIGKDIIKANNKNADKNRKILEDHGIVAFDFMGAIGSGKTLLIEKLINELKDEYKIACI 66
           L++   I+  N+  A  NR   E H I A++ M + GSGKT L+E L   L   Y +  I
Sbjct: 39  LSVIHKILDKNDVEAAHNRGHFEAHQISAYNLMSSPGSGKTTLLECLHEYLGLTYGV--I 96

Query: 67  AGDVIAKYDAGRMEKHGVKVIPLNTGKECHLDAHQIGHCFHDLDLDNLDIIFIENVGNLI 126
            GD+    DA R+   G++ + + TG  CHLDA  +    H L LD   I FIENVGNL+
Sbjct: 97  EGDLETSKDADRLLAKGIQAVQIQTGSACHLDAFMVHGALHRLTLDEGSIAFIENVGNLV 156

Query: 127 CPTDFDLGTHKRTVVVSVTEGDDTVEKHPEIFKTANLTIINKIDISEAVGADPQKMLNDA 186
           CP  +D+GTH+  V++SV EGDD + K+P +F+ A+L +I K D++       +      
Sbjct: 157 CPASYDVGTHRNIVLLSVPEGDDKIAKYPVMFRRADLVLITKSDLTPYFDFSIESAKESL 216

Query: 187 KKINKDMEVLLTAIKHDNGVSDVVNFIKK 215
           + +N   EV+  ++K   G+  +  ++K+
Sbjct: 217 RALNPQCEVIELSVKDGRGMDRLATWLKQ 245