Pairwise Alignments

Query, 224 a.a., hydrogenase nickel incorporation protein HypB from Methanococcus maripaludis S2

Subject, 277 a.a., hydrogenase accessory protein HypB (RefSeq) from Shewanella loihica PV-4

 Score =  154 bits (388), Expect = 2e-42
 Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 2/207 (0%)

Query: 7   LNIGKDIIKANNKNADKNRKILEDHGIVAFDFMGAIGSGKTLLIEKLINELKDEYKIACI 66
           L++   I+  N+  A  NR   E H I AF+ M + GSGKT L+E L       Y +  +
Sbjct: 67  LSVIHKILDKNDHEAAHNRAHFEAHNITAFNLMSSPGSGKTTLLEHLKEYTDLNYGV--V 124

Query: 67  AGDVIAKYDAGRMEKHGVKVIPLNTGKECHLDAHQIGHCFHDLDLDNLDIIFIENVGNLI 126
            GD+    DA R+   G+    + TG  CHLDA  +    H +DL  LDI F+ENVGNL+
Sbjct: 125 EGDLETSRDADRLTAKGIPAFQIQTGSACHLDAFMVHDALHHVDLAALDICFVENVGNLV 184

Query: 127 CPTDFDLGTHKRTVVVSVTEGDDTVEKHPEIFKTANLTIINKIDISEAVGADPQKMLNDA 186
           CP  +D+GTH   V+VSV EGDD +EK+P +F+ A+L +I K D+        ++     
Sbjct: 185 CPASYDVGTHFNIVLVSVPEGDDKIEKYPVMFRKADLVLITKADLLPHFDFSVEEAKAQV 244

Query: 187 KKINKDMEVLLTAIKHDNGVSDVVNFI 213
           K++N D EV+ T+IK  + +  VV+++
Sbjct: 245 KRLNPDAEVITTSIKDGDSMRAVVDWL 271