Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 297 a.a., sulfate ABC transporter, permease protein CysW (NCBI) from Rhodospirillum rubrum S1H

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 67/247 (27%), Positives = 131/247 (53%), Gaps = 16/247 (6%)

Query: 9   LLFLVISLFLLLFVLLPLLNMILNP-----GNVAGAFNDSEVIKSLLVSIKAAGTATVLA 63
           LL L   LFL LF+LLPL+ + +            A  D + + S+ +++  A  +  L 
Sbjct: 31  LLILAAVLFLCLFLLLPLVAVFVEALSDGVATYFRALTDPDAMSSIRLTLMVAAISVPLN 90

Query: 64  IFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGI-MILAFFYGTSIGRGIEDIGF 122
           +  G+  ++ +A++ F G++++  +ID+P ++   + G+  +L F      G  + D G 
Sbjct: 91  LVFGVAAAWAVAKHDFPGRSLLVTLIDLPFSVSPVISGLCYVLVFGAQGWFGPWLVDHGV 150

Query: 123 EIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEE---ELENVSRTLGASKIKTFFNISLP 179
            IV    GIV+  ++V LP++    R+   ++EE   + E  + +LGA+  +TF  ++LP
Sbjct: 151 RIVFAVPGIVLATVFVTLPFI---ARELIPLMEEQGSDDEEAALSLGATGWQTFMRVTLP 207

Query: 180 LIKNNLVSGSILTFARGISEVGAILIVA----YFPKTTPVLILDRFNEYGLSSSKPISVI 235
            IK  L+ G +L  AR + E GA+ +V+        T P+ +   +NEY  +++  ++ +
Sbjct: 208 NIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGLTNTMPLHVEILYNEYSFAAAFAVASL 267

Query: 236 MIVLSII 242
           + VL+++
Sbjct: 268 LAVLALV 274